Discovery of ianthelliformisamines D–G from the sponge Suberea ianthelliformis and the total synthesis of ianthelliformisamine D

• Sasha Hayes,
• Yaoying Lu,
• Bernd H. A. Rehm and
• Rohan A. Davis

Beilstein J. Org. Chem. 2024, 20, 3205–3214, doi:10.3762/bjoc.20.266

• ]. Methylenes resonating at δH 3.14, 1.64 and 3.20 were assigned to a three-carbon alkyl spin system that was flanked by nitrogen atoms [NH–(CH2)3–N] based on COSY correlations from the amide proton at δH 8.04. A terminal pyrrolidone was assigned based on COSY data for the three remaining methylene protons (δH

• integrated for three protons and a triplet (δH 8.23) that were indicative of a protonated terminal amino group and a secondary amide functionality, respectively [7]. 13C NMR shifts and COSY correlations associated with the methylene signals of 7 enabled the assignment of an NH–(CH2)3–NH2 moiety, which was

Hypervalent iodine-mediated intramolecular alkene halocyclisation

• Charu Bansal,
• Oliver Ruggles,
• Albert C. Rowett and
• Alastair J. J. Lennox

Beilstein J. Org. Chem. 2024, 20, 3113–3133, doi:10.3762/bjoc.20.258

• good yields, demonstrating the scope of the reaction. The authors proposed an alternative reaction mechanism to those already described, in which trans-aminopalladation of the alkene, mediated by Pd(II), occurs with intramolecular attack of the nitrogen on the terminal carbon, generating a 6-membered

• system was used due to concerns with the long-term stability of iodosylbenzene and unwanted reactions of BF3·Et2O with other reagents. In addition, a catalytic system was reported that employed 20 mol % iodotoluene with 1 equivalent of m-CPBA as terminal oxidant. The authors proposed that

• guanidines 61 (Scheme 33) alongside their chlorinated cyclic guanidines 44 (vide supra) [47]. Koser’s reagent was employed with LiBr to form 5- and 6-membered brominated cyclic guanidines 61 and 61’ in good yields from allylic guanidines 43. A range of substrates with substituents on the terminal alkene were

Synthesis of the 1,5-disubstituted tetrazole-methanesulfonylindole hybrid system via high-order multicomponent reaction

• Cesia M. Aguilar-Morales,
• América A. Frías-López,
• Nadia V. Emilio-Velázquez,
• Alejandro Islas-Jácome,
• Angelica Judith Granados-López,
• Jorge Gustavo Araujo-Huitrado,
• Yamilé López-Hernández,
• Hiram Hernández-López,
• Luis Chacón-García,
• Jesús Adrián López and
• Carlos J. Cortés-García

Beilstein J. Org. Chem. 2024, 20, 3077–3084, doi:10.3762/bjoc.20.256

• trifluoroethanol as the solvent and at room temperature [23][24][25][26]. In the initial reaction, propargylamine served as a bifunctional reagent, with the primary amine group participating in the first step and the terminal alkyne promoting the subsequent heteroannulation. (Scheme 2). As observed in our previous

Chemical structure metagenomics of microbial natural products: surveying nonribosomal peptides and beyond

• Thomas Ma and
• John Chu

Beilstein J. Org. Chem. 2024, 20, 3050–3060, doi:10.3762/bjoc.20.253

• , respectively. Based on the position of the nucleophile, a NRP can be cyclized head-to-tail, via an amino acid side-chain, a nucleophilic heteroatom on the N-terminal fatty acyl chain, or as a multimer of repeating sub-structures (Figure 5b). The ring size, ratio of ʟ- and ᴅ-amino acids, etc. may also be the

Advances in radical peroxidation with hydroperoxides

• Oleg V. Bityukov,
• Pavel Yu. Serdyuchenko,
• Andrey S. Kirillov,
• Gennady I. Nikishin,
• Vera A. Vil’ and
• Alexander O. Terent’ev

Beilstein J. Org. Chem. 2024, 20, 2959–3006, doi:10.3762/bjoc.20.249

• peroxides, oxaziridines, and their derived species are often applied as terminal oxidants [7][8]. The weakness of the O–O bond allows alkoxy radicals to form through homolysis or reduction [9]. The generated alkoxy radicals provide an accessible tool for selective radical cascades, where a variety of

Synthesis of fluorinated acid-functionalized, electron-rich nickel porphyrins

• Mike Brockmann,
• Jonas Lobbel,
• Lara Unterriker and
• Rainer Herges

Beilstein J. Org. Chem. 2024, 20, 2954–2958, doi:10.3762/bjoc.20.248

• –CH2–(CF2)n–COOCH3) with triflate as leaving group in terminal position are easily accessible and versatile building blocks for attaching long chain acids (pKa 0–1) to substrates in Williamson ether-type reactions. Keywords: acid-functionalized porphyrin; electron-rich porphyrin; nickel porphyrin

N-Glycosides of indigo, indirubin, and isoindigo: blue, red, and yellow sugars and their cancerostatic activity

• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 2840–2869, doi:10.3762/bjoc.20.240

• antitumor effects were related to the inhibition of the survival pathway of c-Jun and JNK2 (Jun N-terminal kinase). In an additional study, it was shown that treatment with derivative E-β-46b results in an increase of melanoma cell sensitivity for death ligands and allows to overcome resistance against

Copper-catalyzed yne-allylic substitutions: concept and recent developments

• Shuang Yang and
• Xinqiang Fang

Beilstein J. Org. Chem. 2024, 20, 2739–2775, doi:10.3762/bjoc.20.232

• terminal alkyne is the active species in the reactions. In this regard, merging the unique feature of Cu-catalyzed propargylic substitution with allylic substitution is a feasible solution to the challenge, which will represent a new sort of substitution reaction. From 2022, the Cu-catalyzed yne-allylic

• chelation interaction between the enolate derived from acyclic 1,3-dicarbonyl compounds and copper (Scheme 5, 8a–j). Detailed control experiments indicate that the terminal alkyne moiety is critical and the reaction proceeds through an SN1 mechanism. An outer-sphere nucleophilic attack through copper

• demonstrated that the terminal alkyne unit is crucial for the process and the reactions using different isomers all proceed via the same intermediate. Nonlinear relationship experiments proved that the active catalyst is a mono-copper complex containing one ligand. A catalytic cycle is proposed in which copper

Computational design for enantioselective CO₂ capture: asymmetric frustrated Lewis pairs in epoxide transformations

• Maxime Ferrer,
• Iñigo Iribarren,
• Tim Renningholtz,
• Ibon Alkorta and
• Cristina Trujillo

Beilstein J. Org. Chem. 2024, 20, 2668–2681, doi:10.3762/bjoc.20.224

• group facilitates a greater stabilisation of the intermediary positive charge at the central carbon compared to the hydrogen after bond-breaking at the terminal carbon, thereby reducing the activation barrier. Henceforth, in this paper, the optimised TSs will consistently represent the breaking of the O

Phenylseleno trifluoromethoxylation of alkenes

• Clément Delobel,
• Armen Panossian,
• Gilles Hanquet,
• Frédéric R. Leroux,
• Fabien Toulgoat and
• Thierry Billard

Beilstein J. Org. Chem. 2024, 20, 2434–2441, doi:10.3762/bjoc.20.207

• were usually obtained when the substituents at the double bond differed significantly. When the substituent hindrance was less pronounced, the ratio was less significant (2f, 2j). Interestingly, a reverse regioselectivity was observed depending on the starting alkenes. For the terminal alkenes, the

• Markovnikov product (i.e. with the CF3O in the “internal” position) was predominant, whereas for the allylic alcohol derivatives, the anti-Markovnikov addition (i.e. with the CF3O in the “terminal” position) was predominant (2e vs 2g and 2h vs 2i). This could be rationalized by the electronic effect of the

• oxygen atom which disfavors the episelenonium opening with the CF3O− anion in the closest position to the oxygen atom. It is noteworthy that the regioisomeric ratio of terminal alkenes (2e, 2i) evolved with the reaction time. The amount of the kinetic terminal regioisomer (anti-Markovnikov – 2e’, 2i

Asymmetric organocatalytic synthesis of chiral homoallylic amines

• Nikolay S. Kondratyev and
• Andrei V. Malkov

Beilstein J. Org. Chem. 2024, 20, 2349–2377, doi:10.3762/bjoc.20.201

• resolution of chiral secondary allylboronates 35. In late 2020, an important method for synthesising enantiopure terminal (E)-trifluoromethyl homoallylic amines 44 was described by Szabó and co-workers (Scheme 9) [31]. This methodology is based on the use of enantiopure α-trifluoromethylallylboronic acids 43

• -diaminonaphthalene derivatives 42, which after hydrolysis and extraction into toluene, were reacted with indole, 3-methylindole, 3,4-dihydroisoquinoline, and benzoyl hydrazone ethyl glyoxylate ester to afford terminal (E)-trifluoromethyl homoallylic amines 44 with up to 3 adjacent stereocentres with high to

• terminal halogen or acetate. The 2-ethynylallylsilane decomposed in the reaction conditions, while simple allyltrimethylsilane was unreactive. Among allylstannanes, the (3-phenylallyl)tri-n-butylstannane was also unreactive. Interestingly, both tetraallylsilane and tetraallylstannane gave racemic products

Tandem diazotization/cyclization approach for the synthesis of a fused 1,2,3-triazinone-furazan/furoxan heterocyclic system

• Yuri A. Sidunets,
• Valeriya G. Melekhina and
• Leonid L. Fershtat

Beilstein J. Org. Chem. 2024, 20, 2342–2348, doi:10.3762/bjoc.20.200

• obtained. Thus, we have demonstrated that the terminal nitrogen atom in the diazonium fragment of intermediate 9 becomes the N5 atom of compound 8 (corresponding 15N NMR spectra are provided in Supporting Information File 1). To explore the potential application of the obtained compounds 1 and 7, we

Improved deconvolution of natural products’ protein targets using diagnostic ions from chemical proteomics linkers

• Andreas Wiest and
• Pavel Kielkowski

Beilstein J. Org. Chem. 2024, 20, 2323–2341, doi:10.3762/bjoc.20.199

• prerequisite required for a probe used in a chemical proteomic study is an embedded bioorthogonal handle, for example a terminal alkyne or azide, which is able to react chemoselectively with a tag facilitating unambiguous identification by a selected analytical technique, for example LC–MS/MS (Figure 1) [35

• CuAAC due to its rapid reaction kinetics, robustness, and relatively small steric hindrance of the terminal alkyne, which is usually attached to the probe core scaffold to form an alkyne probe [5][63]. Once the covalent bond between the probe and protein is formed, the cells are lysed, and the probe

• alkyne probe from the CuAAC reaction mixture or by increasing the concentration of the reducing agent such as tris(2-carboxyethyl)phosphine (TCEP). The reversed chemical proteomics approach in which the azide probe and alkyne tag are used suffers from similar unspecific reactivity of the terminal alkyne

gem-Difluorination of carbon–carbon triple bonds using Brønsted acid/Bu₄NBF₄ or electrogenerated acid

• Mizuki Yamaguchi,
• Hiroki Shimao,
• Kengo Hamasaki,
• Keiji Nishiwaki,
• Shigenori Kashimura and
• Kouichi Matsumoto

Beilstein J. Org. Chem. 2024, 20, 2261–2269, doi:10.3762/bjoc.20.194

• the use of HF or its complexes as a reagent. These reactions seem to proceed via the formation of the vinyl fluoride as the intermediate [25][26][27][28]. In the first example, Olah and co-workers reported the reaction of terminal alkynes with HF/pyridine (Olah reagent) (Figure 1, reaction 1) [29][30

• the case of an aliphatic terminal alkyne, such as dec-1-yne (1d), the 19F NMR study indicated 46% yield with method A (Table 2, entry 5), but it was difficult to purify and isolate product 2d because of the low molecular weight. Scale up conditions of method A, for the purpose of the isolation, led to

• substrate for gem-difluorination to yield the difluorinated compound 2e (Table 2, entries 8 and 9). Interestingly, terminal alkynes bearing –OH and –O– functional groups, such as 1f and 1g, were used for reactions, and the corresponding products 2f and 2g were obtained by both methods (Table 2, entries 10

From perfluoroalkyl aryl sulfoxides to ortho thioethers

• Yang Li,
• Guillaume Dagousset,
• Emmanuel Magnier and
• Bruce Pégot

Beilstein J. Org. Chem. 2024, 20, 2108–2113, doi:10.3762/bjoc.20.181

• -position of the nitrile is also detrimental to the reaction, resulting in less than 30% yield of the desired product 3d. Nevertheless, the reaction is compatible with halogens elsewhere in longer nitrile alkyl chains (3e,g). Finally, it was possible to obtain the terminal alkene 3f with a yield of 58

Multicomponent syntheses of pyrazoles via (3 + 2)-cyclocondensation and (3 + 2)-cycloaddition key steps

• Ignaz Betcke,
• Alissa C. Götzinger,
• Maryna M. Kornet and
• Thomas J. J. Müller

Beilstein J. Org. Chem. 2024, 20, 2024–2077, doi:10.3762/bjoc.20.178

• -carbon alkynoyl building blocks [121][122] could be generated catalytically [123], thereby facilitating reactions under mild reaction conditions and opening novel one-pot pathways for consecutive multicomponent syntheses of pyrazoles. Sonogashira alkynylation of terminal alkynes and (hetero)aroyl

• possible in a pseudo-seven-component reaction starting from 1,4-diiodobenzene. The product 108c showed strong solvatochromism. The synthesis of pyrazoles from terminal alkynes, acyl chlorides, and hydrazines [124][126] can be extended by subsequent halogenation at position 4 with N-halosuccinimide 109 (X

• synthesized 4 halopyrazoles 111 and their Suzuki products 110 fluoresce blue in solution and have quantum yields of 29–72 % (Scheme 40) [137]. The Suzuki coupling can also be used for the functionalization of pyrazoles. For this purpose, p-bromo-substituted terminal alkynes 112, acyl chlorides 114, and

Allostreptopyrroles A–E, β-alkylpyrrole derivatives from an actinomycete Allostreptomyces sp. RD068384

• Marwa Elsbaey,
• Naoya Oku,
• Mohamed S. A. Abdel-Mottaleb and
• Yasuhiro Igarashi

Beilstein J. Org. Chem. 2024, 20, 1981–1987, doi:10.3762/bjoc.20.174

• HRESITOFMS and NMR analytical data (Table 2), inferring that compounds 2 and 3 were isomers of 1. In fact, their NMR spectra were closely similar to those for 1 except a little difference in the alkyl side chain terminus. In a COSY spectrum of 2, the terminal doublet methyl proton was correlated with an

• oxymethine H15, which in turn was correlated with a methylene H214. The pyrrole moiety with the same substituents as 1 was deduced from HMBC correlations. Therefore, compound 2 was determined to have a non-branched alkyl chain with a hydroxy group at C15. Meanwhile, 3 possessed a terminal ethyl group, which

Development of a flow photochemical process for a π-Lewis acidic metal-catalyzed cyclization/radical addition sequence: in situ-generated 2-benzopyrylium as photoredox catalyst and reactive intermediate

• Masahiro Terada,
• Zen Iwasaki,
• Ryohei Yazaki,
• Shigenobu Umemiya and
• Jun Kikuchi

Beilstein J. Org. Chem. 2024, 20, 1973–1980, doi:10.3762/bjoc.20.173

• photochemical sequential transformation. With the optimal flow reaction conditions in hand, we next investigated the scope of substrates 1 by introducing a series of substituents to the terminal phenyl group. The results of the batch reaction system are also shown for comparison in Table 2 (right-hand side) [55

• reactions of aldehydes with a series of substituents introduced to the terminal phenyl group were further investigated (Table 3, entries 4–7). Aldehydes having an electron-donating methyl group and an electron-withdrawing bromo group at the para-position of the phenyl moiety gave products 3o and 3p

Solvent-dependent chemoselective synthesis of different isoquinolinones mediated by the hypervalent iodine(III) reagent PISA

• Ze-Nan Hu,
• Yan-Hui Wang,
• Jia-Bing Wu,
• Ze Chen,
• Dou Hong and
• Chi Zhang

Beilstein J. Org. Chem. 2024, 20, 1914–1921, doi:10.3762/bjoc.20.167

• peracetic acid as a terminal oxidant [20]. Recently, Kočovský et al. disclosed a method employing 2-methylbenzamide and benzonitrile to yield 3-aryl-substituted isoquinolinone derivatives in the presence of n-butyllithium [21]. On the other hand, the intramolecular oxidative cyclization is also a viable

2-Heteroarylethylamines in medicinal chemistry: a review of 2-phenethylamine satellite chemical space

• Carlos Nieto,
• Alejandro Manchado,
• Ángel García-González,
• David Díez and
• Narciso M. Garrido

Beilstein J. Org. Chem. 2024, 20, 1880–1893, doi:10.3762/bjoc.20.163

• antihypertensive activity was demonstrated for a series of flexible secondary amines incorporating terminal aromatic rings by Bagli et al. [26]. A blood pressure lowering effect was observed for 2-hydroxy-2-thienylethylamines 24–26 (Scheme 5), which was related to typical antihypertensive pathways like adrenergic

• , Menghin and co-workers [61] explored flexible chain incorporations at the terminal nitrogen of histaprodifen generating hits 79–86 (Scheme 11). Finally, the N,N-bis(2-imidazolyl)ethyl)-substituted amine superhistaprodifen 87 cluster was exhaustively synthesized and tested for their agonist activity

The Groebke–Blackburn–Bienaymé reaction in its maturity: innovation and improvements since its 21st birthday (2019–2023)

• Cristina Martini,
• Muhammad Idham Darussalam Mardjan and
• Andrea Basso

Beilstein J. Org. Chem. 2024, 20, 1839–1879, doi:10.3762/bjoc.20.162

Discovery of antimicrobial peptides clostrisin and cellulosin from Clostridium: insights into their structures, co-localized biosynthetic gene clusters, and antibiotic activity

• Moisés Alejandro Alejo Hernandez,
• Katia Pamela Villavicencio Sánchez,
• Rosendo Sánchez Morales,
• Karla Georgina Hernández-Magro Gil,
• David Silverio Moreno-Gutiérrez,
• Eddie Guillermo Sanchez-Rueda,
• Yanet Teresa-Cruz,
• Brian Choi,
• Armando Hernández Garcia,
• Alba Romero-Rodríguez,
• Oscar Juárez,
• Siseth Martínez-Caballero,
• Mario Figueroa and
• Corina-Diana Ceapă

Beilstein J. Org. Chem. 2024, 20, 1800–1816, doi:10.3762/bjoc.20.159

• was co-expressed with the corresponding precursor peptide in the same E. coli strain (expected size 150 kDa). The precursor peptides and the peptidase domain of CloPt1 were fused with a 6xHis tag at their N-terminal end for purification purposes (Figure S7 in Supporting Information File 1). After

• analysis of the CloA1 and CloA2 precursor peptides Clostrisin and cellulosin were purified through non-native means using a Ni2+ column due to a 6xHis tag at the N-terminal end, followed by elution via imidazole gradient (refer to Figures S7A and S7B in Supporting Information File 1 for SDS-PAGE analysis

• seconds off, for a total of 10 minutes at 4.0 potency). Finally, the sample was centrifuged for 30 min at 4 °C at 10,000 rpm. Supernatants were stored at −80 °C until purification. The C39 peptidase domain, and the clostrisin and cellulosin lanthipeptides were linked with a 6xHis N-terminal tag to perform

Syntheses and medicinal chemistry of spiro heterocyclic steroids

• Laura L. Romero-Hernández,
• Ana Isabel Ahuja-Casarín,
• Penélope Merino-Montiel,
• Sara Montiel-Smith,
• José Luis Vega-Báez and
• Jesús Sandoval-Ramírez

Beilstein J. Org. Chem. 2024, 20, 1713–1745, doi:10.3762/bjoc.20.152

• yields (82–85%) (Scheme 28). The authors proposed a free radical mechanism facilitated by hydrogen peroxide, generating a primary radical at the terminal nitrogen atom -CO-HN• which then adds to the carbon atom of the imino group. The reaction mechanism was substantiated by theoretical calculations

Chemo-enzymatic total synthesis: current approaches toward the integration of chemical and enzymatic transformations

• Ryo Tanifuji and
• Hiroki Oguri

Beilstein J. Org. Chem. 2024, 20, 1693–1712, doi:10.3762/bjoc.20.151

• prenyltransferase (PT) domain located at the C-terminus of BscA (Scheme 2A). Subsequently, the terpene cyclase (TC) domain at the N-terminal of BscA generates fusicocca-2,10(14)-diene (6), which bears the common 5/8/5 fused tricyclic scaffold common to this natural products family. Sequential oxidative conversions

Oxidation of benzylic alcohols to carbonyls using N-heterocyclic stabilized λ³-iodanes

• Thomas J. Kuczmera,
• Pim Puylaert and
• Boris J. Nachtsheim

Beilstein J. Org. Chem. 2024, 20, 1677–1683, doi:10.3762/bjoc.20.149

• easily overoxidized to carboxylic acids. Over the past decades a variety of methods have been developed, utilizing toxic heavy metals such as pyridinium dichromate (PDC) [3][4][5] or manganese dioxide (Figure 1) [6][7]. Molecular oxygen [8] and peroxides [9][10] can also be used as inexpensive terminal

• was investigated, potentially leading to the formation of a hydroxy(chloro)iodane intermediate. This intermediate either liberates hypochlorous acid as the terminal oxidant or undergoes a direct ligand exchange with the alcohol, followed by oxidative elimination to form the aldehyde. Thus, these