Synthesis of new asparagine-based glycopeptides for future scanning tunneling microscopy investigations

• Laura Sršan and
• Thomas Ziegler

Beilstein J. Org. Chem. 2020, 16, 888–894, doi:10.3762/bjoc.16.80

• example, in anti-HIV therapy, MUC1-based antitumor vaccines, or as antibiotics [12][13][14]. Especially glycans bearing noncanonical amino acids, which can only be introduced into a peptide by organic synthesis, are suitable for cancer therapy since they show better resistance to enzymatic degradation in

Reaction of indoles with aromatic fluoromethyl ketones: an efficient synthesis of trifluoromethyl(indolyl)phenylmethanols using K₂CO₃/n-Bu₄PBr in water

• Thanigaimalai Pillaiyar,
• Masoud Sedaghati and
• Gregor Schnakenburg

Beilstein J. Org. Chem. 2020, 16, 778–790, doi:10.3762/bjoc.16.71

• reported for their promising anti-HIV inhibitory activities [23], see for example compounds III and IV (Figure 1). However, these compounds were synthesized from multiple synthetic routes with the involvement of air sensitive conditions. Trifluoromethyl-substituted (1H-indol-3-yl)methanol derivatives can

• preparation of 3,3'-, and 3,6'-DIMs, which are known to possess a wide variety of biological activities, including anti-inflammatory, and anticancer effects. Additionally, trifluoromethyl(indolyl)phenylmethanols itselft have various biological properties including anti-HIV activity. The developed new

A systematic review on silica-, carbon-, and magnetic materials-supported copper species as efficient heterogeneous nanocatalysts in “click” reactions

• Pezhman Shiri and
• Jasem Aboonajmi

Beilstein J. Org. Chem. 2020, 16, 551–586, doi:10.3762/bjoc.16.52

• catalysts; Sharpless–Meldal C–N bond-forming reaction; silica/carbon/magnetic materials; Introduction Heterocycles are a class of organic compounds with significant biological activities [1][2][3][4][5][6][7][8][9][10], including antimicrobial [2], antibacterial [3], anti-HIV [4], antiviral [5

• ], antiparkinsonian [6], and anticancer [10] properties. Particularly, triazoles illustrate distinguished moieties well distributed in natural products with biological properties [2][3][4][9][10], including antimicrobial [2], antibacterial [3], antifungal [3], anti-HIV [4], and anticancer [10] activities. One of the

Synthesis of 4-amino-5-fluoropyrimidines and 5-amino-4-fluoropyrazoles from a β-fluoroenolate salt

• Tobias Lucas,
• Jule-Philipp Dietz and
• Till Opatz

Beilstein J. Org. Chem. 2020, 16, 445–450, doi:10.3762/bjoc.16.41

• stage [15][16][17][18][19]. Fluorinated pyrimidines, pyrimidine analogues and pyrazoles [20][21] play a prominent role in several clinically important pharmaceuticals [22][23][24][25]. These compounds act against HIV or HIV-related diseases [26], such as opportunistic fungal infections, and represent

• nucleoside analogues which can either act as antimetabolites or as nucleoside reverse transcriptase inhibitors (NRTIs). Two of the most common 5-fluoropyrimidines are the cytostatic 5-fluorouracil (1) [27] and the antimycotic prodrug 5-fluorocytosine (2) [28][29], which is also part of the anti-HIV agents

The reaction of arylmethyl isocyanides and arylmethylamines with xanthate esters: a facile and unexpected synthesis of carbamothioates

• Narasimhamurthy Rajeev,
• Toreshettahally R. Swaroop,
• Ahmad I. Alrawashdeh,
• Shofiur Rahman,
• Abdullah Alodhayb,
• Seegehalli M. Anil,
• Kuppalli R. Kiran,
• Chandra,
• Paris E. Georghiou,
• Kanchugarakoppal S. Rangappa and
• Maralinganadoddi P. Sadashiva

Beilstein J. Org. Chem. 2020, 16, 159–167, doi:10.3762/bjoc.16.18

• ) have been reported to have antimicrobial [1], antifungal (e.g., tolnaftate and tolciclate) [2], antimycobacterial [3], human leucocyte elastase inhibitory [4], TRPV1 antagonistic [5], and PPARα1γ dual antagonistic [6] properties, and also act as intermediates in the syntheses of HIV-1 integrase ligands

Microwave-assisted synthesis of 2-substituted 4,5,6,7-tetrahydro-1,3-thiazepines from 4-aminobutanol

• María C. Mollo,
• Natalia B. Kilimciler,
• Juan A. Bisceglia and
• Liliana R. Orelli

Beilstein J. Org. Chem. 2020, 16, 32–38, doi:10.3762/bjoc.16.5

• applications as antibiotics [1], antiproliferative agents [2], anti-inflammatories [3] and antithrombotics [4]. They are also found in many bioactive natural products [5][6][7][8], some of which display anti-HIV-1 [9] and antimitotic activities [10], among others. Thiazolines also find use in organic synthesis

Construction of trisubstituted chromone skeletons carrying electron-withdrawing groups via PhIO-mediated dehydrogenation and its application to the synthesis of frutinone A

• Qiao Li,
• Chen Zhuang,
• Donghua Wang,
• Wei Zhang,
• Rongxuan Jia,
• Fengxia Sun,
• Yilin Zhang and
• Yunfei Du

Beilstein J. Org. Chem. 2019, 15, 2958–2965, doi:10.3762/bjoc.15.291

• antibacterical [4], antifungal [5][6], anticancer [7], antioxidant [8], anti-HIV [9], antiulcer, immunostimulator [10], anti-inflammatory [11], as well as biocidal [12], wound-healing [13], and immune-stimulatory activities [14]. For instance, flavoxate [15][16] is a chromone derivative that was employed as an

• anticholinergic agent for its antimuscarinic effects [3][17]; apigenin can function as an antiviral drug for the treatment of HIV [18][19], cancer [20][21][22], and other viral infections [23]; pranlukast [24] can be used in the treatment of allergic rhinitis [25] and asthma [26]; and khellin [27] has been proved

Automated glycan assembly of arabinomannan oligosaccharides from Mycobacterium tuberculosis

• Alonso Pardo-Vargas,
• Priya Bharate,
• Martina Delbianco and
• Peter H. Seeberger

Beilstein J. Org. Chem. 2019, 15, 2936–2940, doi:10.3762/bjoc.15.288

• for infection [6][7][8][9][10] due to their roles in the interaction with host cells, interference with macrophage activation, and immunosuppression of T cell responses [11][12]. Diagnosis of tuberculosis in patients with HIV coinfections is possible by immunodetection of AMs and their lipidated

• helped to identify an antibody targeting the 5-methylthio-ᴅ-xylofuranose AM [7][14]. The Fujifilm SILVAMP TB LAM immunoassay chip provided a threefold higher sensitivity than Alere LF-LAM. Still, current technologies lack sensitivity and are limited to patients coinfected with HIV [7][10][15

Design, synthesis and investigation of water-soluble hemi-indigo photoswitches for bioapplications

• Daria V. Berdnikova

Beilstein J. Org. Chem. 2019, 15, 2822–2829, doi:10.3762/bjoc.15.275

• required to provide detailed explanation of this effect. Recently, a proof-of-principle for the application of hemi-indigo derivative Z-2 as a binder for the human immunodeficiency virus type 1 (HIV-1) RNA with photoswitchable fluorescent properties was provided [12]. It was shown that hemi-indigo Z-2

• associates with the regulatory elements of HIV-1 genome RNA with high affinity (Kb ≈ 105 M−1) while keeping its photoswitching properties. Both, the initial Z-2 and photoinduced E-2 forms remain bound to RNA. Most notably, the interaction of Z-2 with HIV-1 RNA produces a remarkable light-up effect whose

Recent advances on the transition-metal-catalyzed synthesis of imidazopyridines: an updated coverage

• Gagandeep Kour Reen,
• Ashok Kumar and
• Pratibha Sharma

Beilstein J. Org. Chem. 2019, 15, 1612–1704, doi:10.3762/bjoc.15.165

• failure), zolpidem (for treatment of insomnia), zolimidine (antiulcer drug), alpidem and saripidem (anxiolytic agents) and some are under development, like GSK812397 (for the treatment of HIV), ND-09759 and Q203 (for tuberculosis) (Figure 1) [6][7][8][9][10]. The synthesis of imidazopyridines (IPs) is

A novel three-component reaction between isocyanides, alcohols or thiols and elemental sulfur: a mild, catalyst-free approach towards O-thiocarbamates and dithiocarbamates

• András György Németh,
• György Miklós Keserű and
• Péter Ábrányi-Balogh

Beilstein J. Org. Chem. 2019, 15, 1523–1533, doi:10.3762/bjoc.15.155

• discovered, including HIV-1 reverse transcriptase inhibition activity [6][7][8][9][10][11]. Moreover, their utilization as highly regio- and stereoselective organocatalysts in specific types of chemical tranformations [12][13][14][15][16][17] was introduced, as well. More recently, O-thiocarbamates have been

Doebner-type pyrazolopyridine carboxylic acids in an Ugi four-component reaction

• Maryna V. Murlykina,
• Oleksandr V. Kolomiets,
• Maryna M. Kornet,
• Yana I. Sakhno,
• Sergey M. Desenko,
• Victoriya V. Dyakonenko,
• Svetlana V. Shishkina,
• Oleksandr A. Brazhko,
• Vladimir I. Musatov,
• Alexander V. Tsygankov,
• Erik V. Van der Eycken and
• Valentyn A. Chebanov

Beilstein J. Org. Chem. 2019, 15, 1281–1288, doi:10.3762/bjoc.15.126

• biological actions: antiproliferative [6][7][8][9], antimicrobial [10][11], anxiolytic [12], analgesic [13], hypnotic [13], antiviral [13], anti-HIV [13] activities, etc. Soural et al. [14] explored different data and showed the relevance of compounds composed of two or more heterocyclic rings for drug

An improved synthesis of adefovir and related analogues

• David J. Jones,
• Eileen M. O’Leary and
• Timothy P. O’Sullivan

Beilstein J. Org. Chem. 2019, 15, 801–810, doi:10.3762/bjoc.15.77

• caused by the hepatitis B virus (HBV) [3][4][5] and the herpes simplex virus (HSV, Figure 1) [5][6]. While 1 possesses inhibitory activity against the human immunodeficiency virus (HIV) [1][5], it has not been approved by the FDA for the treatment of HIV as the dose required to elicit inhibition can

• form alcohol 4 and further base-mediated alkylation with tosylate 5 affords phosphonate ester intermediate 6. Subsequent dealkylation of 6 using trimethylsilyl bromide (TMSBr) gives adefovir (1). The related analogue tenofovir, developed as an anti-HIV agent, may be prepared in a similar manner [37][38

Synthesis of C₃-symmetric star-shaped molecules containing α-amino acids and dipeptides via Negishi coupling as a key step

• Sambasivarao Kotha and
• Saidulu Todeti

Beilstein J. Org. Chem. 2019, 15, 371–377, doi:10.3762/bjoc.15.33

• the complex interactions between cells and pathogens, e.g., the human immunodeficiency virus (HIV-1) [6]. The HIV-1 envelope protein is present as a C3-symmetric trimer on the viruses’ surface [7], and the virus entry into the cell is mediated by its interactions with cellular receptors. To explore

A novel and efficient synthesis of phenanthrene derivatives via palladium/norbornadiene-catalyzed domino one-pot reaction

• Yue Zhong,
• Wen-Yu Wu,
• Shao-Peng Yu,
• Tian-Yuan Fan,
• Hai-Tao Yu,
• Nian-Guang Li,
• Zhi-Hao Shi,
• Yu-Ping Tang and
• Jin-Ao Duan

Beilstein J. Org. Chem. 2019, 15, 291–298, doi:10.3762/bjoc.15.26

• used as fundamental building blocks or intermediates in the synthesis of complex natural products such as tuberosinone [1], aristolactam Ia [2] and (−)-R-tylophorine [3] (Figure 1). Meanwhile, they also demonstrate a wide range of biological activities including anticancer [4], anti-HIV [5

Quinolines from the cyclocondensation of isatoic anhydride with ethyl acetoacetate: preparation of ethyl 4-hydroxy-2-methylquinoline-3-carboxylate and derivatives

• Nicholas G. Jentsch,
• Jared D. Hume,
• Emily B. Crull,
• Samer M. Beauti,
• Amy H. Pham,
• Julie A. Pigza,
• Jacques J. Kessl and
• Matthew G. Donahue

Beilstein J. Org. Chem. 2018, 14, 2529–2536, doi:10.3762/bjoc.14.229

• acid residue required for the synthesis of key arylquinolines involved in an HIV integrase project. Keywords: cyclodehydration; HIV integrase; isatoic anhydride; masked acyl cyanide; quinoline; Introduction In stark contrast to the prevalence of the quinoline heterocycle in natural products [1

• ], quinolines are only present in approximately 2% of FDA approved prescription pharmaceuticals [2]. Recently, 2,3,4-trisubstituted arylquinolines such as BI 224436 1 [3][4] and 2 [5][6] have been shown to exhibit inhibitory activity against HIV-1 integrase that is essential for viral replication through

• [C13H12BrNO3 + Na]+ 331.989277; found: 331.988788; anal. calcd for C13H12BrNO3: C, 39.70; H, 1.67; found C, 39.51; H, 1.74. Investigational non-catalytic HIV-1 Integrase inhibitors. Boehringer Ingelheim retrosynthesis of quinoline 1. Quinoline ring condensation strategies. Isatoic anhydrides from anthranilic

Glycosylation reactions mediated by hypervalent iodine: application to the synthesis of nucleosides and carbohydrates

• Yuichi Yoshimura,
• Hideaki Wakamatsu,
• Yoshihiro Natori,
• Yukako Saito and
• Noriaki Minakawa

Beilstein J. Org. Chem. 2018, 14, 1595–1618, doi:10.3762/bjoc.14.137

• (PhI(OH)OTs) resulted in a decrease of the reaction yield (Table 2, entries 5–7). To prove the usefulness of the oxidative coupling reaction mediated by hypervalent iodine, the reaction was applied to the synthesis of a carbocyclic nucleoside derivative designed as a potential anti-HIV agent. As a

• cytosine analogues [63]. During the course of conversion, all the stereoisomers were separated. Among them, only the cytosine derivative 99 showed weak anti-HIV activity (Scheme 13 and Table 3). An oxidative coupling reaction for synthesizing carbocyclic nucleosides mediated by hypervalent iodine was

• ’-deoxy- and 2’,3’-dideoxydidehydronucleosides, some of which are known to have anti-HIV activity (Table 4). To reveal the scope of this reaction, we designed a new dihydropyranonucleoside as a potential anti-HIV agent and attempted to synthesize it by using the oxidative coupling reaction [70]. First

Lanyamycin, a macrolide antibiotic from Sorangium cellulosum, strain Soce 481 (Myxobacteria)

• Lucky S. Mulwa,
• Rolf Jansen,
• Dimas F. Praditya,
• Kathrin I. Mohr,
• Patrick W. Okanya,
• Joachim Wink,
• Eike Steinmann and
• Marc Stadler

Beilstein J. Org. Chem. 2018, 14, 1554–1562, doi:10.3762/bjoc.14.132

• become a major concern of governments and health workers due to the economic and health burden it has brought. HCV has been found to be the main cause of liver associated deaths globally putting it in the same league of HIV and tuberculosis in terms of worldwide health challenges [1]. Approximately 71

• of which were found to exert anti-HIV activity while sorazolones, argyrins and tubulysins showed antitumor activity or cytotoxicity [4][5][6][7][8]. In our studies on the secondary metabolites of Sorangium cellulosum (strain Soce 481), we observed strong antifungal activity in the raw extract. On RP

Synthesis of trifluoromethylated 2H-azirines through Togni reagent-mediated trifluoromethylation followed by PhIO-mediated azirination

• Jiyun Sun,
• Xiaohua Zhen,
• Huaibin Ge,
• Guangtao Zhang,
• Xuechan An and
• Yunfei Du

Beilstein J. Org. Chem. 2018, 14, 1452–1458, doi:10.3762/bjoc.14.123

• potential anti-HIV drug bearing a NCF3 moiety. 2H-Azirines are a class of highly strained and reactive molecules containing a C–N double bond. The exclusive framework can be found in some natural products [43][44][45][46][47], which were shown to possess antibiotic activities [43][44]. Furthermore

A selective removal of the secondary hydroxy group from ortho-dithioacetal-substituted diarylmethanols

• Anna Czarnecka,
• Emilia Kowalska,
• Agnieszka Bodzioch,
• Joanna Skalik,
• Marek Koprowski,
• Krzysztof Owsianik and
• Piotr Bałczewski

Beilstein J. Org. Chem. 2018, 14, 1229–1237, doi:10.3762/bjoc.14.105

• ] or vasodilating activities (II) [6]. Other ones have been reported as inhibitors of HIV-1 integrase and viral replication in cells [7] or antitubercular agents (III) [8][9]. Various diarylmethane-based molecules, like tolterodine (IV) [10], podophyllotoxin (V) [11] and lasofoxifene (VI) [12] have

An overview of recent advances in duplex DNA recognition by small molecules

• Sayantan Bhaduri,
• Nihar Ranjan and
• Dev P. Arya

Beilstein J. Org. Chem. 2018, 14, 1051–1086, doi:10.3762/bjoc.14.93

• ]. Gottesfeld et al. synthesized a series of Py/Im HP-polyamide–DNA alkylator (chlorambucil) (HP-Chl) conjugates in order to bind and alkylate within the HIV-1 promoter region, thereby blocking HIV-1 replication and screened them against human colon carcinoma cell lines [74][75]. It has been observed that

Stimuli-responsive oligonucleotides in prodrug-based approaches for gene silencing

• Françoise Debart,
• Christelle Dupouy and
• Jean-Jacques Vasseur

Beilstein J. Org. Chem. 2018, 14, 436–469, doi:10.3762/bjoc.14.32

• PNATAR fragment directed against the TAR RNA region of the HIV genome conjugated to TPP inhibited HIV replication in CEM cell lines with an IC50 of 1 μM, while the unconjugated 16-mer PNATAR was inactive in these tests. The anti-HIV activity confirmed that the PNATAR was not sequestered in mitochondria

One-pot preparation of 4-aryl-3-bromocoumarins from 4-aryl-2-propynoic acids with diaryliodonium salts, TBAB, and Na₂S₂O₈

• Teppei Sasaki,
• Katsuhiko Moriyama and
• Hideo Togo

Beilstein J. Org. Chem. 2018, 14, 345–353, doi:10.3762/bjoc.14.22

• ], antitumor [1], antiasthmatic [12], and antiviral including anti-HIV [13][14]. Comprehensive synthetic studies of coumarins and their derivatives have been carried out [15][16]. Typically, coumarins are prepared by the acid-catalyzed condensation of 2-alkynoic acids and phenols or the condensation of β

Fluorogenic PNA probes

• Tirayut Vilaivan

Beilstein J. Org. Chem. 2018, 14, 253–281, doi:10.3762/bjoc.14.17

• ), HIV and HVB (hepatitis B virus surface antigen) in a single tube was demonstrated [141]. Addition of a very low concentration of bovine serum albumin (BSA, 0.01%) was shown to enhance the performance of the PNA–GO-based DNA sensing platform by reducing the non-specific adsorption of PNA–DNA duplexes

5-Aminopyrazole as precursor in design and synthesis of fused pyrazoloazines

• Ranjana Aggarwal and
• Suresh Kumar

Beilstein J. Org. Chem. 2018, 14, 203–242, doi:10.3762/bjoc.14.15

• practical guidance to synthetic chemists for further research. Synthesis of pyrazolo[3,4-b]pyridines Pyrazolo[3,4-b]pyridines are important fused heterocycles due to their well-known synthetic and medicinal potential as good vasodilators [29], hypotensive [30], HIV reverse transcriptase inhibitors [31

• -aminopyrazolo[1,5-a]pyrimidine derivatives 155 (Scheme 43). All the synthesized compounds were screened for their anti-HIV activities in MT4 cell cultures and compound 155 (R1 = 2,4,6-trimethyl and R2 = 4-cyano) was found as most inhibiting for HIV-1 replication having an EC50 = 0.070 μM and the SI (selectivity